Recent Changes in Courses/NgsIntro1502 Web retrieved at 13:04 (GMT)

Transcriptome De Novo Assembly Trinity By efficiently constructing and analyzing sets of de Bruijn graphs, Trinity fully reconstructs a large fraction of transcripts...
Transcriptome Mapping First Please read everything carefully! Reference genome based: Tophat and Cufflinks A common problem in the analysis of RNA seq data is...
Schedule This course is given in Trippelrummet at Navet ( E10) at BMC, ground floor. Click the heading of a topic to see the lecture slides or lab instructions...
Resequencing Analysis The data we will work with comes from the 1000 Genomes Project. Because whole human genomes are very difficult to work with, we will use only...
File Types NOTE : in syntax examples, the dollar sign ($) is not to be printed. The dollar sign is usually an indicator that the text following it should be typed...
UPPMAX Pipeline Exercise NOTE : in syntax examples, the dollar sign ($) is not to be printed. The dollar sign is usually an indicator that the text following it should...
UPPMAX Tutorial NOTE : in syntax examples, the dollar sign ($) is not to be printed. The dollar sign is usually an indicator that the text following it should be...
Advanced Linux NOTE: in syntax examples, the dollar sign ($) is not to be printed. The dollar sign is usually an indicator that the text following it should be typed...
Linux Introduction NOTE : in syntax examples, the dollar sign ($) is not to be printed. The dollar sign is usually an indicator that the text following it should...
Welcome to the course This wiki contains information and materials for the course Introduction to Bioinformatics using NGS data, held in Uppsala Feb 9 13, 2015....
Courses/NgsIntro1502 Web Preferences The following settings are web preferences of the Courses/NgsIntro1502 web. These preferences override the site level...
Transcriptome Mapping First Please read everything carefully! Reference genome based: Tophat and Cufflinks A common problem in the analysis of RNA seq data is...
Mac Keyboards They are not optimal for beginners.. Here are screenshots of they layouts while holding different keys. Not holding any modifier key: Holding shift...
Allele specific copy numbers in Tumor Samples http://patchwork.r forge.r project.org/ Conventions Commands executed at commandline: `$` Commands executed within R...
Normalisation and differential expression of RNASeq data Content Expected learning outcome In this exercise you will get familiar with using the DESeq R package...
BMC: Enter through the SciLifeLab entrance (C11). All exercises and lectures are held in the E10 compartment of BMC.
Pre course Material Introduction and chapter 1 2 from http:///unixtut/ You must use http://bellard.org/jslinux/ to try the commands in the tutorial, otherwise...
Transcriptome De Novo Assembly Trinity By efficiently constructing and analyzing sets of de Bruijn graphs, Trinity fully reconstructs a large fraction of transcripts...
Advlinux, cheat sheet Assignment Ownership and permissions Q: Change permission from to rw rw wx One answer: chmod ug rw filename chmod o wx filename Assignment...
Travel with Uppsala city buses: Pay your bus ticket with your mobile phone: send a text message, UV to 72472 (25 SEK) Please see www.ul.se for timetables. Use...
Home Create New Topic Index Search Changes Statistics Courses
Webname: Web: Courses/NgsIntro1502
Statistics for Courses/NgsIntro1502 Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for...
Top Menu of Courses/NgsIntro1502 Web This topic defines the menu structure of the Courses/NgsIntro1502 web, used by the TopMenuSkin. 1 Web`...
Web Notification This is a subscription service to be automatically notified by e mail when topics change in this 1 web. This is a convenient service, so you do...
TWiki`s Courses/NgsIntro1502 web The 1 web of TWiki. TWiki is a Web Based Collaboration Platform for the Enterprise.
/Courses/NgsIntro1502 The 1 web of TWiki. TWiki is a Web Based Collaboration Platform for the Enterprise.

 

Show 10, 20, 50, 100, 500, 1000 results per page, or show all.

Related topics: RSS feed, rounded corners RSS feed, ATOM feed, WebNotify, site changes, site map

Topic revision: r1 - 2006-11-15 - TWikiContributor
 
This site is powered by the TWiki collaboration platform Powered by PerlCopyright © 2008-2015 by the contributing authors. All material on this collaboration platform is the property of the contributing authors.
Ideas, requests, problems regarding TWiki? Send feedback